| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| 6-FAM (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            496 | 516 | N/A | |
| 6-FAM (Fluorescein) | 
                                                     | 
                                            
                                                     | 
                                            495 | 520 | N/A | |
| Fluorescein dT | 
                                                     | 
                                            
                                                     | 
                                            
                                                     | 
                                            495 | 520 | N/A | 
| Cy3™ | 
                                                     | 
                                            
                                                     | 
                                            
                                                     | 
                                            550 | 564 | TYE™ 563 | 
| TAMRA™ | 
                                                     | 
                                            559 | 583 | N/A | ||
| JOE (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            529 | 555 | MAX (NHS Ester) | |
| Cy5™ | 
                                                     | 
                                            
                                                     | 
                                            
                                                     | 
                                            648 | 668 | TYE™ 665 | 
| TAMRA (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            
                                                     | 
                                            559 | 583 | N/A | 
| MAX (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            531 | 556 | JOE (NHS Ester) | |
| TET™ | 
                                                     | 
                                            522 | 539 | N/A | ||
| Cy5.5™ | 
                                                     | 
                                            
                                                     | 
                                            685 | 706 | TYE 705 | |
| ROX (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            588 | 608 | ATTO™ Rho101 (NHS Ester) | |
| TYE™ 563 | 
                                                     | 
                                            
                                                     | 
                                            549 | 563 | Cy3™ | |
| Yakima Yellow® | 
                                                     | 
                                            524 | 551 | N/A | ||
| HEX | 
                                                     | 
                                            538 | 555 | N/A | ||
| TEX 615 | 
                                                     | 
                                            
                                                     | 
                                            596 | 613 | Texas Red®-X (NHS Ester) | |
| TYE™ 665 | 
                                                     | 
                                            
                                                     | 
                                            645 | 665 | Cy5™ | |
| TYE 705 | 
                                                     | 
                                            686 | 704 | Cy5.5™ | ||
| SUN | 
                                                     | 
                                            538 | 554 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| ATTO™ 425 (NHS Ester) | 
                                                     | 
                                            437 | 483 | N/A | ||
| ATTO™ 488 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            502 | 522 | Alexa Fluor® 488 (NHS Ester) | |
| ATTO™ 532 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            534 | 554 | N/A | |
| ATTO™ 550 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            560 | 575 | N/A | |
| ATTO™ 565 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            570 | 591 | N/A | |
| ATTO™ Rho101 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            592 | 609 | ROX (NHS Ester) | |
| ATTO™ 590 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            593 | 622 | Alexa Fluor® 594 (NHS Ester) | |
| ATTO™ 633 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            635 | 653 | N/A | |
| ATTO™ 647N (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            649 | 662 | Alexa Fluor® 647 (NHS Ester) | |
| ATTO™ 700 (NHS Ester) | 
                                                     | 
                                            700 | 719 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| Alexa Fluor® 488 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            492 | 517 | ATTO™ 488 (NHS Ester) | |
| Alexa Fluor® 532 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            527 | 553 | N/A | |
| Alexa Fluor® 546 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            556 | 571 | N/A | |
| Alexa Fluor® 594 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            584 | 616 | ATTO™ 590 (NHS Ester) | |
| Alexa Fluor® 647 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            650 | 670 | ATTO™ 647N (NHS Ester) | |
| Alexa Fluor® 660 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            661 | 691 | N/A | |
| Alexa Fluor® 750 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            753 | 782 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| 5' IRDye® 700 | 
                                                     | 
                                            684 | 702 | N/A | ||
| 5' IRDye® 800 | 
                                                     | 
                                            791 | 809 | N/A | ||
| 5' IRDye® 800CW (NHS Ester) | 
                                                     | 
                                            767 | 791 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| Rhodamine Green™-X (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            504 | 531 | N/A | |
| Rhodamine Red™ (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            574 | 594 | N/A | |
| 5-TAMRA™ (Azide) | 
                                                     | 
                                            
                                                     | 
                                            546 | 579 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | 
|---|---|---|---|---|---|---|
| 6-FAM (Azide) | 
                                                     | 
                                            
                                                     | 
                                            493 | 517 | N/A | |
| Alexa Fluor 405 | 
                                                     | 
                                            401 | 421 | N/A | ||
| Texas Red®-X (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            598 | 617 | TEX 615 | |
| Lightcycler® 640 (NHS Ester) | 
                                                     | 
                                            
                                                     | 
                                            620 | 635 | N/A | |
| Dy 750 (NHS Ester) | 
                                                     | 
                                            747 | 776 | N/A | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | Category | 
|---|---|---|---|---|---|---|---|
| Alexa Fluor 405 | 
 | 
                401 | 421 | N/A | Additional | ||
| ATTO™ 425 (NHS Ester) | 
 | 
                437 | 483 | N/A | ATTOTM Dyes | ||
| Alexa Fluor® 488 (NHS Ester) | 
 | 
                
 | 
                492 | 517 | ATTO™ 488 (NHS Ester) | Alexa Fluor® Dyes | |
| 6-FAM (Azide) | 
 | 
                
 | 
                493 | 517 | N/A | Additional | |
| 6-FAM (Fluorescein) | 
 | 
                
 | 
                495 | 520 | N/A | Freedom™ Dyes | |
| Fluorescein dT | 
 | 
                
 | 
                
 | 
                495 | 520 | N/A | Freedom™ Dyes | 
| 6-FAM (NHS Ester) | 
 | 
                
 | 
                496 | 516 | N/A | Freedom™ Dyes | |
| ATTO™ 488 (NHS Ester) | 
 | 
                
 | 
                502 | 522 | Alexa Fluor® 488 (NHS Ester) | ATTOTM Dyes | |
| Rhodamine Green™-X (NHS Ester) | 
 | 
                
 | 
                504 | 531 | N/A | Rhodamine Dyes | |
| TET™ | 
 | 
                522 | 539 | N/A | Freedom™ Dyes | ||
| Yakima Yellow® | 
 | 
                524 | 551 | N/A | Freedom™ Dyes | ||
| Alexa Fluor® 532 (NHS Ester) | 
 | 
                
 | 
                527 | 553 | N/A | Alexa Fluor® Dyes | |
| JOE (NHS Ester) | 
 | 
                
 | 
                529 | 555 | MAX (NHS Ester) | Freedom™ Dyes | |
| MAX (NHS Ester) | 
 | 
                
 | 
                531 | 556 | JOE (NHS Ester) | Freedom™ Dyes | |
| ATTO™ 532 (NHS Ester) | 
 | 
                
 | 
                534 | 554 | N/A | ATTOTM Dyes | |
| HEX | 
 | 
                538 | 555 | N/A | Freedom™ Dyes | ||
| SUN | 
 | 
                538 | 554 | N/A | Freedom™ Dyes | ||
| 5-TAMRA™ (Azide) | 
 | 
                
 | 
                546 | 579 | N/A | Rhodamine Dyes | |
| TYE™ 563 | 
 | 
                
 | 
                549 | 563 | Cy3™ | Freedom™ Dyes | |
| Cy3™ | 
 | 
                
 | 
                
 | 
                550 | 564 | TYE™ 563 | Freedom™ Dyes | 
| Alexa Fluor® 546 (NHS Ester) | 
 | 
                
 | 
                556 | 571 | N/A | Alexa Fluor® Dyes | |
| TAMRA™ | 
 | 
                559 | 583 | N/A | Freedom™ Dyes | ||
| TAMRA (NHS Ester) | 
 | 
                
 | 
                
 | 
                559 | 583 | N/A | Freedom™ Dyes | 
| ATTO™ 550 (NHS Ester) | 
 | 
                
 | 
                560 | 575 | N/A | ATTOTM Dyes | |
| ATTO™ 565 (NHS Ester) | 
 | 
                
 | 
                570 | 591 | N/A | ATTOTM Dyes | |
| Rhodamine Red™ (NHS Ester) | 
 | 
                
 | 
                574 | 594 | N/A | Rhodamine Dyes | |
| Alexa Fluor® 594 (NHS Ester) | 
 | 
                
 | 
                584 | 616 | ATTO™ 590 (NHS Ester) | Alexa Fluor® Dyes | |
| ROX (NHS Ester) | 
 | 
                
 | 
                588 | 608 | ATTO™ Rho101 (NHS Ester) | Freedom™ Dyes | |
| ATTO™ Rho101 (NHS Ester) | 
 | 
                
 | 
                592 | 609 | ROX (NHS Ester) | ATTOTM Dyes | |
| ATTO™ 590 (NHS Ester) | 
 | 
                
 | 
                593 | 622 | Alexa Fluor® 594 (NHS Ester) | ATTOTM Dyes | |
| TEX 615 | 
 | 
                
 | 
                596 | 613 | Texas Red®-X (NHS Ester) | Freedom™ Dyes | |
| Texas Red®-X (NHS Ester) | 
 | 
                
 | 
                598 | 617 | TEX 615 | Additional | |
| Lightcycler® 640 (NHS Ester) | 
 | 
                
 | 
                620 | 635 | N/A | Additional | |
| ATTO™ 633 (NHS Ester) | 
 | 
                
 | 
                635 | 653 | N/A | ATTOTM Dyes | |
| TYE™ 665 | 
 | 
                
 | 
                645 | 665 | Cy5™ | Freedom™ Dyes | |
| Cy5™ | 
 | 
                
 | 
                
 | 
                648 | 668 | TYE™ 665 | Freedom™ Dyes | 
| ATTO™ 647N (NHS Ester) | 
 | 
                
 | 
                649 | 662 | Alexa Fluor® 647 (NHS Ester) | ATTOTM Dyes | |
| Alexa Fluor® 647 (NHS Ester) | 
 | 
                
 | 
                650 | 670 | ATTO™ 647N (NHS Ester) | Alexa Fluor® Dyes | |
| Alexa Fluor® 660 (NHS Ester) | 
 | 
                
 | 
                661 | 691 | N/A | Alexa Fluor® Dyes | |
| 5' IRDye® 700 | 
 | 
                684 | 702 | N/A | LI-COR IRDyes® | ||
| Cy5.5™ | 
 | 
                
 | 
                685 | 706 | TYE 705 | Freedom™ Dyes | |
| TYE 705 | 
 | 
                686 | 704 | Cy5.5™ | Freedom™ Dyes | ||
| ATTO™ 700 (NHS Ester) | 
 | 
                700 | 719 | N/A | ATTOTM Dyes | ||
| Dy 750 (NHS Ester) | 
 | 
                747 | 776 | N/A | Additional | ||
| Alexa Fluor® 750 (NHS Ester) | 
 | 
                
 | 
                753 | 782 | N/A | Alexa Fluor® Dyes | |
| 5' IRDye® 800CW (NHS Ester) | 
 | 
                767 | 791 | N/A | LI-COR IRDyes® | ||
| 5' IRDye® 800 | 
 | 
                791 | 809 | N/A | LI-COR IRDyes® | 
| Dye | 5' | Int | 3' | Ex. | Em. | Alternative | Category | 
|---|---|---|---|---|---|---|---|
| Alexa Fluor 405 | 
 | 
                401 | 421 | N/A | Additional | ||
| ATTO™ 425 (NHS Ester) | 
 | 
                437 | 483 | N/A | ATTOTM Dyes | ||
| 6-FAM (NHS Ester) | 
 | 
                
 | 
                496 | 516 | N/A | Freedom™ Dyes | |
| Alexa Fluor® 488 (NHS Ester) | 
 | 
                
 | 
                492 | 517 | ATTO™ 488 (NHS Ester) | Alexa Fluor® Dyes | |
| 6-FAM (Azide) | 
 | 
                
 | 
                493 | 517 | N/A | Additional | |
| 6-FAM (Fluorescein) | 
 | 
                
 | 
                495 | 520 | N/A | Freedom™ Dyes | |
| Fluorescein dT | 
 | 
                
 | 
                
 | 
                495 | 520 | N/A | Freedom™ Dyes | 
| ATTO™ 488 (NHS Ester) | 
 | 
                
 | 
                502 | 522 | Alexa Fluor® 488 (NHS Ester) | ATTOTM Dyes | |
| Rhodamine Green™-X (NHS Ester) | 
 | 
                
 | 
                504 | 531 | N/A | Rhodamine Dyes | |
| TET™ | 
 | 
                522 | 539 | N/A | Freedom™ Dyes | ||
| Yakima Yellow® | 
 | 
                524 | 551 | N/A | Freedom™ Dyes | ||
| Alexa Fluor® 532 (NHS Ester) | 
 | 
                
 | 
                527 | 553 | N/A | Alexa Fluor® Dyes | |
| SUN | 
 | 
                538 | 554 | N/A | Freedom™ Dyes | ||
| ATTO™ 532 (NHS Ester) | 
 | 
                
 | 
                534 | 554 | N/A | ATTOTM Dyes | |
| JOE (NHS Ester) | 
 | 
                
 | 
                529 | 555 | MAX (NHS Ester) | Freedom™ Dyes | |
| HEX | 
 | 
                538 | 555 | N/A | Freedom™ Dyes | ||
| MAX (NHS Ester) | 
 | 
                
 | 
                531 | 556 | JOE (NHS Ester) | Freedom™ Dyes | |
| TYE™ 563 | 
 | 
                
 | 
                549 | 563 | Cy3™ | Freedom™ Dyes | |
| Cy3™ | 
 | 
                
 | 
                
 | 
                550 | 564 | TYE™ 563 | Freedom™ Dyes | 
| Alexa Fluor® 546 (NHS Ester) | 
 | 
                
 | 
                556 | 571 | N/A | Alexa Fluor® Dyes | |
| ATTO™ 550 (NHS Ester) | 
 | 
                
 | 
                560 | 575 | N/A | ATTOTM Dyes | |
| 5-TAMRA™ (Azide) | 
 | 
                
 | 
                546 | 579 | N/A | Rhodamine Dyes | |
| TAMRA™ | 
 | 
                559 | 583 | N/A | Freedom™ Dyes | ||
| TAMRA (NHS Ester) | 
 | 
                
 | 
                
 | 
                559 | 583 | N/A | Freedom™ Dyes | 
| ATTO™ 565 (NHS Ester) | 
 | 
                
 | 
                570 | 591 | N/A | ATTOTM Dyes | |
| Rhodamine Red™ (NHS Ester) | 
 | 
                
 | 
                574 | 594 | N/A | Rhodamine Dyes | |
| ROX (NHS Ester) | 
 | 
                
 | 
                588 | 608 | ATTO™ Rho101 (NHS Ester) | Freedom™ Dyes | |
| ATTO™ Rho101 (NHS Ester) | 
 | 
                
 | 
                592 | 609 | ROX (NHS Ester) | ATTOTM Dyes | |
| TEX 615 | 
 | 
                
 | 
                596 | 613 | Texas Red®-X (NHS Ester) | Freedom™ Dyes | |
| Alexa Fluor® 594 (NHS Ester) | 
 | 
                
 | 
                584 | 616 | ATTO™ 590 (NHS Ester) | Alexa Fluor® Dyes | |
| Texas Red®-X (NHS Ester) | 
 | 
                
 | 
                598 | 617 | TEX 615 | Additional | |
| ATTO™ 590 (NHS Ester) | 
 | 
                
 | 
                593 | 622 | Alexa Fluor® 594 (NHS Ester) | ATTOTM Dyes | |
| Lightcycler® 640 (NHS Ester) | 
 | 
                
 | 
                620 | 635 | N/A | Additional | |
| ATTO™ 633 (NHS Ester) | 
 | 
                
 | 
                635 | 653 | N/A | ATTOTM Dyes | |
| ATTO™ 647N (NHS Ester) | 
 | 
                
 | 
                649 | 662 | Alexa Fluor® 647 (NHS Ester) | ATTOTM Dyes | |
| TYE™ 665 | 
 | 
                
 | 
                645 | 665 | Cy5™ | Freedom™ Dyes | |
| Cy5™ | 
 | 
                
 | 
                
 | 
                648 | 668 | TYE™ 665 | Freedom™ Dyes | 
| Alexa Fluor® 647 (NHS Ester) | 
 | 
                
 | 
                650 | 670 | ATTO™ 647N (NHS Ester) | Alexa Fluor® Dyes | |
| Alexa Fluor® 660 (NHS Ester) | 
 | 
                
 | 
                661 | 691 | N/A | Alexa Fluor® Dyes | |
| 5' IRDye® 700 | 
 | 
                684 | 702 | N/A | LI-COR IRDyes® | ||
| TYE 705 | 
 | 
                686 | 704 | Cy5.5™ | Freedom™ Dyes | ||
| Cy5.5™ | 
 | 
                
 | 
                685 | 706 | TYE 705 | Freedom™ Dyes | |
| ATTO™ 700 (NHS Ester) | 
 | 
                700 | 719 | N/A | ATTOTM Dyes | ||
| Dy 750 (NHS Ester) | 
 | 
                747 | 776 | N/A | Additional | ||
| Alexa Fluor® 750 (NHS Ester) | 
 | 
                
 | 
                753 | 782 | N/A | Alexa Fluor® Dyes | |
| 5' IRDye® 800CW (NHS Ester) | 
 | 
                767 | 791 | N/A | LI-COR IRDyes® | ||
| 5' IRDye® 800 | 
 | 
                791 | 809 | N/A | LI-COR IRDyes® |